STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TERG_03663Stress-response A/B barrel domain-containing protein. (110 aa)    
Predicted Functional Partners:
TERG_03555
Tryptophan synthase.
    
 0.719
TERG_07922
Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine; Belongs to the GcvT family.
  
 0.688
TERG_00621
DAO domain-containing protein.
  
 0.686
TERG_05477
Uncharacterized protein.
  
 0.686
TERG_07655
DAO domain-containing protein.
  
 0.686
TERG_00737
Fungal_trans domain-containing protein.
   
 0.670
TERG_00385
Pyr_redox_2 domain-containing protein.
   
 0.670
TERG_01702
IGR domain-containing protein.
   
 0.670
TERG_05936
Pyr_redox_2 domain-containing protein.
   
 0.670
TERG_06147
Rieske domain-containing protein.
   
 0.670
Your Current Organism:
Trichophyton rubrum
NCBI taxonomy Id: 559305
Other names: T. rubrum CBS 118892, Trichophyton rubrum CBS 118892
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