STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TERG_04202Uncharacterized protein. (117 aa)    
Predicted Functional Partners:
TERG_04485
Uncharacterized protein.
    
 0.906
TERG_06203
WD_REPEATS_REGION domain-containing protein.
    
 0.613
TERG_07134
Serine/threonine protein kinase.
    
 0.611
TERG_02452
WD_REPEATS_REGION domain-containing protein.
    
 0.609
TERG_00217
Ubiquitin-40S ribosomal protein S27a.
    
 0.588
TERG_04610
BZIP domain-containing protein.
    
 0.588
TERG_04575
TAF domain-containing protein.
    
  0.582
TERG_01923
J domain-containing protein.
    
 0.579
TERG_00739
Ubiquitin-like protein 1.
    
 0.570
TERG_02482
TFIID_20kDa domain-containing protein.
    
 0.570
Your Current Organism:
Trichophyton rubrum
NCBI taxonomy Id: 559305
Other names: T. rubrum CBS 118892, Trichophyton rubrum CBS 118892
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.