STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TERG_04215UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (166 aa)    
Predicted Functional Partners:
TERG_02285
UBA_e1_C domain-containing protein; Belongs to the ubiquitin-activating E1 family.
    
 0.969
TERG_01927
RING-type domain-containing protein.
    
 
 0.969
TERG_02029
Uncharacterized protein.
    
 
 0.951
TERG_00644
ER membrane protein complex subunit 4; Belongs to the EMC4 family.
    
   0.947
TERG_05729
UBIQUITIN_CONJUGAT_2 domain-containing protein.
    
0.939
TERG_04836
NOT2_3_5 domain-containing protein.
    
 
 0.933
TERG_07138
Polyubiquitin.
    
 0.933
TERG_04832
CUE domain-containing protein.
    
 
 0.875
TERG_07007
UBX domain-containing protein.
   
 
 0.869
TERG_04656
Ubiquitin-like modifier-activating enzyme ATG7.
 
  
 0.850
Your Current Organism:
Trichophyton rubrum
NCBI taxonomy Id: 559305
Other names: T. rubrum CBS 118892, Trichophyton rubrum CBS 118892
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.