STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TERG_04309Uncharacterized protein. (726 aa)    
Predicted Functional Partners:
TERG_11627
ABC transporter domain-containing protein.
 
     0.933
TERG_00588
Uncharacterized protein.
   
  
 0.579
TERG_03414
Uncharacterized protein.
   
 0.560
TERG_12373
Uncharacterized protein.
 
 
 0.538
TERG_02410
I/LWEQ domain-containing protein.
    
 0.510
TERG_06530
Ubiquitin carboxyl-terminal hydrolase.
    
  0.508
TERG_04224
ABC transporter.
    
 0.492
TERG_04442
Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.
    
 0.482
TERG_08751
Uncharacterized protein.
  
  
 
0.478
TERG_01201
Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.
    
 0.474
Your Current Organism:
Trichophyton rubrum
NCBI taxonomy Id: 559305
Other names: T. rubrum CBS 118892, Trichophyton rubrum CBS 118892
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