STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TERG_04420Uncharacterized protein. (324 aa)    
Predicted Functional Partners:
TERG_01274
Uncharacterized protein.
   
   0.986
TERG_03793
Uncharacterized protein.
   
   0.986
TERG_01415
Ribosomal protein L24.
   
 0.980
TERG_00720
Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.
   
 0.980
TERG_04450
Ribosomal_L23eN domain-containing protein.
   
 0.980
TERG_01256
KOW domain-containing protein.
   
 0.978
TERG_08612
60S ribosomal protein L39.
   
 0.978
TERG_11688
Uncharacterized protein.
   
 0.976
TERG_00106
60S ribosomal protein L24.
   
 0.976
TERG_07002
60S ribosomal protein L17; Belongs to the universal ribosomal protein uL22 family.
   
 0.976
Your Current Organism:
Trichophyton rubrum
NCBI taxonomy Id: 559305
Other names: T. rubrum CBS 118892, Trichophyton rubrum CBS 118892
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.