STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TERG_04535GOLD domain-containing protein. (210 aa)    
Predicted Functional Partners:
TERG_07961
GOLD domain-containing protein.
   
0.969
TERG_07585
GOLD domain-containing protein.
   
 0.946
TERG_02297
TRAF-type domain-containing protein.
   
 0.920
TERG_00785
Endoplasmic reticulum vesicle protein 25.
   
 0.912
TERG_00787
Endoplasmic reticulum vesicle protein 25.
   
 0.912
TERG_04512
Pre-mRNA-processing protein 45.
 
      0.900
TERG_08818
USP domain-containing protein; Belongs to the peptidase C19 family.
 
      0.891
TERG_06563
S4 RNA-binding domain-containing protein.
   
 
 0.874
TERG_05110
S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.
   
   0.871
TERG_00810
MRP-S28 domain-containing protein.
   
 
 0.867
Your Current Organism:
Trichophyton rubrum
NCBI taxonomy Id: 559305
Other names: T. rubrum CBS 118892, Trichophyton rubrum CBS 118892
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.