TERG_04689 protein (Trichophyton rubrum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

TERG_04689

Importin N-terminal domain-containing protein. (1073 aa)

Predicted Functional Partners:

TERG_01187

0.997

TERG_03370

0.992

TERG_05614

0.958

TERG_07204

0.956

TERG_02940

0.902

TERG_02084

0.880

TERG_04229

0.878

TERG_12396

0.863

TERG_12397

0.863

TERG_06319

0.863

Your Current Organism:

Trichophyton rubrum

NCBI taxonomy Id: 559305
Other names: T. rubrum CBS 118892, Trichophyton rubrum CBS 118892

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
TERG_01187	TERG_02084	F2SFJ9	F2SJA1	GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.	Uncharacterized protein.	0.999
TERG_01187	TERG_03370	F2SFJ9	F2SK17	GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.	NUP214 domain-containing protein.	0.952
TERG_01187	TERG_04689	F2SFJ9	F2SP26	GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.	Importin N-terminal domain-containing protein.	0.997
TERG_01187	TERG_05614	F2SFJ9	F2ST11	GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.	RanBD1 domain-containing protein.	0.960
TERG_01187	TERG_06319	F2SFJ9	F2SV24	GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.	RanBD1 domain-containing protein.	0.964
TERG_01187	TERG_07204	F2SFJ9	F2SXA9	GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.	Peptidase S59 domain-containing protein.	0.852
TERG_01187	TERG_12396	F2SFJ9	A0A080WI21	GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.	Uncharacterized protein.	0.964
TERG_01187	TERG_12397	F2SFJ9	A0A080WN59	GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.	Uncharacterized protein.	0.964
TERG_02084	TERG_01187	F2SJA1	F2SFJ9	Uncharacterized protein.	GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.	0.999
TERG_02084	TERG_03370	F2SJA1	F2SK17	Uncharacterized protein.	NUP214 domain-containing protein.	0.790
TERG_02084	TERG_04689	F2SJA1	F2SP26	Uncharacterized protein.	Importin N-terminal domain-containing protein.	0.880
TERG_02084	TERG_05614	F2SJA1	F2ST11	Uncharacterized protein.	RanBD1 domain-containing protein.	0.931
TERG_02084	TERG_06319	F2SJA1	F2SV24	Uncharacterized protein.	RanBD1 domain-containing protein.	0.959
TERG_02084	TERG_07204	F2SJA1	F2SXA9	Uncharacterized protein.	Peptidase S59 domain-containing protein.	0.818
TERG_02084	TERG_12396	F2SJA1	A0A080WI21	Uncharacterized protein.	Uncharacterized protein.	0.952
TERG_02084	TERG_12397	F2SJA1	A0A080WN59	Uncharacterized protein.	Uncharacterized protein.	0.952
TERG_02940	TERG_04689	F2SLM5	F2SP26	BZIP domain-containing protein.	Importin N-terminal domain-containing protein.	0.902
TERG_03370	TERG_01187	F2SK17	F2SFJ9	NUP214 domain-containing protein.	GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.	0.952
TERG_03370	TERG_02084	F2SK17	F2SJA1	NUP214 domain-containing protein.	Uncharacterized protein.	0.790
TERG_03370	TERG_04689	F2SK17	F2SP26	NUP214 domain-containing protein.	Importin N-terminal domain-containing protein.	0.992