STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TERG_04701Uncharacterized protein. (368 aa)    
Predicted Functional Partners:
TERG_07204
Peptidase S59 domain-containing protein.
    
 0.991
TERG_06087
Uncharacterized protein.
    
 0.990
TERG_08968
Uncharacterized protein.
   
 0.954
TERG_03370
NUP214 domain-containing protein.
    
 0.951
TERG_08314
Uncharacterized protein.
    
 0.929
TERG_07827
Nup188_C domain-containing protein.
    
 0.896
TERG_00587
WD_REPEATS_REGION domain-containing protein.
  
  
 
0.891
TERG_05210
Nup54 domain-containing protein.
   
 0.862
TERG_07915
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
   
 0.841
TERG_06818
Nsp1_C domain-containing protein.
   
 0.836
Your Current Organism:
Trichophyton rubrum
NCBI taxonomy Id: 559305
Other names: T. rubrum CBS 118892, Trichophyton rubrum CBS 118892
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.