STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TERG_03882Uncharacterized protein. (155 aa)    
Predicted Functional Partners:
TERG_05401
Uncharacterized protein.
   
 0.990
TERG_03498
Bms1-type G domain-containing protein.
   
 0.984
TERG_04222
20S-pre-rRNA D-site endonuclease NOB1; Required for the synthesis of 40S ribosome subunits. Has a role in processing 20S pre-rRNA into the mature 18S rRNA, where it is required for cleavage at the 3' end of the mature 18S rRNA (D-site). Accompanies the 20S pre-rRNA from the nucleus to the cytoplasm. Belongs to the NOB1 family.
   
 0.981
TERG_06363
RIO domain-containing protein.
   
 0.978
TERG_04062
Uncharacterized protein.
   
 0.977
TERG_03057
S4 RNA-binding domain-containing protein.
   
 0.974
TERG_02377
40S ribosomal protein S9; Belongs to the universal ribosomal protein uS4 family.
   
  0.957
TERG_00635
40S ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family.
    
 0.954
TERG_04513
WD_REPEATS_REGION domain-containing protein.
   
 
 0.954
RPS1
40S ribosomal protein S1; Belongs to the eukaryotic ribosomal protein eS1 family.
   
 0.952
Your Current Organism:
Trichophyton rubrum
NCBI taxonomy Id: 559305
Other names: T. rubrum CBS 118892, Trichophyton rubrum CBS 118892
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.