STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TERG_03977ATP-grasp domain-containing protein. (520 aa)    
Predicted Functional Partners:
TERG_02892
Gryzun domain-containing protein.
   
 0.889
TERG_05321
Uncharacterized protein.
    
 0.874
TERG_07700
Uncharacterized protein.
    
 0.865
TERG_04646
Uncharacterized protein.
    
 0.859
TERG_06039
Trafficking protein particle complex subunit BET3.
    
 0.852
TERG_04209
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
    
 0.851
TERG_02127
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
    
 0.847
TERG_08461
Trafficking protein particle complex subunit; Plays a key role in the late stages of endoplasmic reticulum to Golgi traffic.
    
 0.847
TERG_03410
Uncharacterized protein.
    
 0.828
TERG_01865
Uncharacterized protein.
    
 0.781
Your Current Organism:
Trichophyton rubrum
NCBI taxonomy Id: 559305
Other names: T. rubrum CBS 118892, Trichophyton rubrum CBS 118892
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.