STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TERG_04032HTH araC/xylS-type domain-containing protein. (432 aa)    
Predicted Functional Partners:
TERG_07184
Uncharacterized protein.
    
 0.906
TERG_02090
Uncharacterized protein.
    
  0.782
TERG_00276
TATA-box-binding protein.
   
 0.758
TERG_00337
TFIIB-type domain-containing protein.
    
 0.731
TERG_06203
WD_REPEATS_REGION domain-containing protein.
    
  0.722
TERG_03436
HTH TFE/IIEalpha-type domain-containing protein.
    
  0.709
TERG_01511
Uncharacterized protein.
    
 0.688
TERG_01938
Uncharacterized protein.
    
 0.688
TERG_08022
BZIP domain-containing protein.
    
 0.676
TERG_06493
Uncharacterized protein.
     
 0.664
Your Current Organism:
Trichophyton rubrum
NCBI taxonomy Id: 559305
Other names: T. rubrum CBS 118892, Trichophyton rubrum CBS 118892
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.