STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TERG_04826Methyltransferase-like protein; Belongs to the methyltransferase superfamily. METL family. (381 aa)    
Predicted Functional Partners:
TERG_08212
SAM_MT_RSMB_NOP domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
 
 
  
 0.819
TERG_08017
Uncharacterized protein.
 
      0.698
TERG_06637
Actin.
    
 
 0.605
TERG_08526
N2,N2-dimethylguanosine tRNA methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. Trm1 family.
   
 
 0.590
TERG_00680
Uncharacterized protein.
    
 
 0.581
TERG_04994
NUC153 domain-containing protein.
   
    0.481
TERG_07939
Uncharacterized protein.
   
    0.481
TERG_01274
Uncharacterized protein.
   
   0.480
TSR3
Ribosome biogenesis protein TSR3; Ribosome biogenesis protein required for processing 35S pre- rRNA at site D; Belongs to the TSR3 family.
 
 
  
 0.473
TERG_02425
RRM domain-containing protein.
   
    0.445
Your Current Organism:
Trichophyton rubrum
NCBI taxonomy Id: 559305
Other names: T. rubrum CBS 118892, Trichophyton rubrum CBS 118892
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