STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TERG_04908Uncharacterized protein. (668 aa)    
Predicted Functional Partners:
TERG_02579
Uncharacterized protein.
    
 0.999
TERG_05964
SRP9-21 domain-containing protein.
   
 0.999
TERG_06388
SRP72 domain-containing protein.
   
 0.999
TERG_07729
Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein). Belongs to the GTP-binding SRP family. SRP54 subfamily.
    
 0.999
TERG_08233
Uncharacterized protein.
    
 0.999
TERG_01254
SRP54 domain-containing protein.
   
 0.965
TERG_00692
Uncharacterized protein.
   
 
 0.936
TERG_03738
60S ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family.
    
 
 0.929
TERG_04450
Ribosomal_L23eN domain-containing protein.
   
 
 0.915
TERG_05788
60S ribosomal protein L20; Belongs to the eukaryotic ribosomal protein eL20 family.
    
   0.914
Your Current Organism:
Trichophyton rubrum
NCBI taxonomy Id: 559305
Other names: T. rubrum CBS 118892, Trichophyton rubrum CBS 118892
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