STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TERG_05369Defective in cullin neddylation protein; Neddylation of cullins play an essential role in the regulation of SCF-type complexes activity. (267 aa)    
Predicted Functional Partners:
TERG_03842
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.984
TERG_04180
RING-box protein 1A.
    
 0.978
TERG_03869
CULLIN_2 domain-containing protein; Belongs to the cullin family.
   
 0.972
TERG_02778
CULLIN_2 domain-containing protein; Belongs to the cullin family.
   
 0.969
TERG_00739
Ubiquitin-like protein 1.
    
 0.937
TERG_05368
60S ribosome subunit biogenesis protein NIP7; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family.
 
      0.888
TERG_05394
TIP120 domain-containing protein.
    
 0.856
TERG_12688
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.841
TERG_12687
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.841
TERG_05275
COP9 signalosome complex subunit 5.
    
 0.841
Your Current Organism:
Trichophyton rubrum
NCBI taxonomy Id: 559305
Other names: T. rubrum CBS 118892, Trichophyton rubrum CBS 118892
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.