STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TERG_05379Uncharacterized protein. (239 aa)    
Predicted Functional Partners:
TERG_03927
Uncharacterized protein.
    
   0.889
TERG_07196
Uncharacterized protein.
    
   0.889
TERG_08481
Uncharacterized protein.
    
   0.800
TERG_01483
Calcium-binding protein NCS-1.
    
   0.537
TERG_05925
Uncharacterized protein.
    
   0.537
TERG_05804
Uncharacterized protein.
    
   0.537
TERG_06126
EF-hand domain-containing protein.
    
   0.537
TERG_06392
Calmodulin; Belongs to the calmodulin family.
    
   0.537
TERG_06573
Calcineurin subunit B.
    
   0.537
Your Current Organism:
Trichophyton rubrum
NCBI taxonomy Id: 559305
Other names: T. rubrum CBS 118892, Trichophyton rubrum CBS 118892
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.