STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TERG_059305-formyltetrahydrofolate cyclo-ligase. (234 aa)    
Predicted Functional Partners:
TERG_06077
Uncharacterized protein.
   
 0.954
TERG_02031
Uncharacterized protein.
    
 0.951
TERG_06128
Phosphoribosylglycinamide formyltransferase.
    
 0.930
TERG_07583
Formyl_trans_N domain-containing protein.
   
 
 0.827
TERG_00708
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
  
 0.795
TERG_00976
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
  
 0.795
TERG_06640
Phosphoribosylamine-glycine ligase.
    
 0.713
TERG_03292
Uncharacterized protein.
    
  0.693
TERG_07503
Phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase.
    
 0.688
TERG_02330
Uncharacterized protein.
    
 0.681
Your Current Organism:
Trichophyton rubrum
NCBI taxonomy Id: 559305
Other names: T. rubrum CBS 118892, Trichophyton rubrum CBS 118892
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.