STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TERG_05433Mitochondrial zinc maintenance protein 1, mitochondrial; Belongs to the complex I LYR family. (123 aa)    
Predicted Functional Partners:
TERG_04632
50S ribosomal protein L3.
   
 
 0.860
TERG_07735
Ribosomal protein L19.
   
 
 0.853
TERG_06362
Uncharacterized protein.
   
 
 0.852
TERG_05360
MRP-L46 domain-containing protein.
   
 
 0.846
TERG_06365
Ribosomal protein L15.
   
   0.845
TERG_08471
50S ribosomal protein L4.
   
 
 0.844
TERG_11931
Ribosomal protein L33.
   
 
 0.837
TERG_04835
Uncharacterized protein.
   
 
 0.837
TERG_02673
Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family.
   
 
 0.834
TERG_08495
L51_S25_CI-B8 domain-containing protein.
   
   0.834
Your Current Organism:
Trichophyton rubrum
NCBI taxonomy Id: 559305
Other names: T. rubrum CBS 118892, Trichophyton rubrum CBS 118892
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.