STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TERG_05529Rif1_N domain-containing protein. (1576 aa)    
Predicted Functional Partners:
TERG_00626
ADP-ribosylation factor-like protein 1; Belongs to the small GTPase superfamily. Arf family.
    
  0.866
TERG_05581
Uncharacterized protein.
    
 0.802
TERG_00460
Uncharacterized protein.
    
  0.771
TERG_04047
Uncharacterized protein.
    
 0.762
TERG_08323
Serine/threonine-protein phosphatase.
    
  0.761
TERG_02916
Uncharacterized protein.
   
 0.748
TERG_04219
BRCT domain-containing protein.
    
 0.726
TERG_03268
NAD-dependent protein deacetylase; Belongs to the sirtuin family. Class I subfamily.
    
  0.723
TERG_05544
Protein kinase domain-containing protein.
   
 0.717
TERG_02424
Uncharacterized protein.
    
 0.676
Your Current Organism:
Trichophyton rubrum
NCBI taxonomy Id: 559305
Other names: T. rubrum CBS 118892, Trichophyton rubrum CBS 118892
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.