STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TERG_05614RanBD1 domain-containing protein. (600 aa)    
Predicted Functional Partners:
TERG_01187
GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
   
 0.960
TERG_04689
Importin N-terminal domain-containing protein.
    
 
 0.958
TERG_02084
Uncharacterized protein.
   
 0.931
TERG_08555
Nuclear pore protein.
   
 0.918
TERG_05933
Uncharacterized protein.
   
 0.911
TERG_05210
Nup54 domain-containing protein.
   
 0.900
TERG_07915
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
   
 0.891
TERG_04596
SUMO-conjugating enzyme ubc9; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.886
TERG_06818
Nsp1_C domain-containing protein.
   
 0.869
TERG_01764
Uncharacterized protein.
    
 0.860
Your Current Organism:
Trichophyton rubrum
NCBI taxonomy Id: 559305
Other names: T. rubrum CBS 118892, Trichophyton rubrum CBS 118892
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