STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TERG_05726Cytochrome c heme lyase; Links covalently the heme group to the apoprotein of cytochrome c. (331 aa)    
Predicted Functional Partners:
TERG_05496
Protoheme IX farnesyltransferase, mitochondrial; Converts protoheme IX and farnesyl diphosphate to heme O. Belongs to the ubiA prenyltransferase family.
   
 
 0.941
TERG_07615
Cytochrome c heme lyase; Links covalently the heme group to the apoprotein of cytochrome c.
  
 
0.914
TERG_05720
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.
     
 0.897
TERG_05729
UBIQUITIN_CONJUGAT_2 domain-containing protein.
 
      0.673
TERG_05731
Uncharacterized protein.
 
    
 0.622
TERG_03528
Cytochrome c; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.
   
 
 0.615
TERG_06674
Cytochrome c1, heme protein, mitochondrial.
   
 
 0.597
TERG_03292
Uncharacterized protein.
   
  
 0.510
TERG_04980
Exonuclease domain-containing protein.
      
 0.487
TERG_08560
Uncharacterized protein.
 
      0.468
Your Current Organism:
Trichophyton rubrum
NCBI taxonomy Id: 559305
Other names: T. rubrum CBS 118892, Trichophyton rubrum CBS 118892
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