STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TERG_06409Uncharacterized protein. (304 aa)    
Predicted Functional Partners:
TERG_05803
WD_REPEATS_REGION domain-containing protein.
    
 0.999
TERG_00131
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
 
  
 0.998
TERG_06140
Pre-mRNA-splicing factor cwc22.
   
 0.998
TERG_06345
Pre-mRNA-splicing factor syf1.
    
 0.998
TERG_08441
Pre-mRNA-splicing factor clf1.
    
 0.998
TERG_06254
Uncharacterized protein.
    
 0.991
TERG_02396
Slu7 domain-containing protein.
   
 0.990
TERG_04259
Uncharacterized protein.
    
 0.990
TERG_07881
Pre-mRNA-splicing factor isy1.
   
 
 0.989
TERG_01874
Tr-type G domain-containing protein.
    
 
 0.988
Your Current Organism:
Trichophyton rubrum
NCBI taxonomy Id: 559305
Other names: T. rubrum CBS 118892, Trichophyton rubrum CBS 118892
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.