STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TERG_06478Peroxisomal membrane protein PEX16. (283 aa)    
Predicted Functional Partners:
TERG_06732
Uncharacterized protein.
    
 0.967
TERG_04092
Uncharacterized protein.
    
 0.892
TERG_05331
RING-type domain-containing protein.
     
 0.834
TERG_02042
SH3 domain-containing protein.
     
 0.825
TERG_00009
Uncharacterized protein.
   
 
 0.821
TERG_03570
Mitochondrial fission 1 protein; Has a role in mitochondrial fission.
     
 0.810
TERG_00284
Pex14_N domain-containing protein.
    
 0.775
TERG_05449
GRIP domain-containing protein.
    
 0.775
TERG_05373
Uncharacterized protein.
   
 
 0.759
TERG_05630
AAA domain-containing protein; Belongs to the AAA ATPase family.
     
 0.732
Your Current Organism:
Trichophyton rubrum
NCBI taxonomy Id: 559305
Other names: T. rubrum CBS 118892, Trichophyton rubrum CBS 118892
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.