STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TERG_06040WD_REPEATS_REGION domain-containing protein. (166 aa)    
Predicted Functional Partners:
TERG_01874
Tr-type G domain-containing protein.
   
 0.999
TERG_02002
Uncharacterized protein.
   
 0.999
TERG_03261
Uncharacterized protein.
   
 0.999
TERG_06219
Pre-mRNA-processing-splicing factor 8.
   
 0.999
TERG_06768
Pre-mRNA-splicing ATP-dependent RNA helicase PRP28.
    
 0.998
TERG_05204
Mitosis protein dim1.
    
 0.995
TERG_05929
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.988
TERG_08456
Small nuclear ribonucleoprotein Sm D2.
   
 0.987
TERG_08493
Uncharacterized protein.
  
 
 0.985
TERG_05803
WD_REPEATS_REGION domain-containing protein.
  
 
   0.982
Your Current Organism:
Trichophyton rubrum
NCBI taxonomy Id: 559305
Other names: T. rubrum CBS 118892, Trichophyton rubrum CBS 118892
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.