STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TERG_06964Uncharacterized protein. (579 aa)    
Predicted Functional Partners:
TERG_06530
Ubiquitin carboxyl-terminal hydrolase.
   
 
 0.990
TERG_12361
Uncharacterized protein.
    
 
 0.869
TERG_07823
Uncharacterized protein.
    
 0.766
TERG_07932
Uncharacterized protein.
    
  0.691
TERG_06087
Uncharacterized protein.
    
 0.689
TERG_00541
Uncharacterized protein.
 
  
 
 0.673
TERG_02906
LsmAD domain-containing protein.
   
 
 0.670
TERG_00783
Guanine nucleotide-binding protein subunit beta-like protein.
   
 
 0.641
PRT1
Eukaryotic translation initiation factor 3 subunit B; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome; Belongs to the eIF-3 subunit B family.
   
 
 0.587
TERG_01212
PUM-HD domain-containing protein.
   
 
 0.579
Your Current Organism:
Trichophyton rubrum
NCBI taxonomy Id: 559305
Other names: T. rubrum CBS 118892, Trichophyton rubrum CBS 118892
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