STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TERG_06618Uncharacterized protein. (594 aa)    
Predicted Functional Partners:
TERG_06597
tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA.
 0.981
TERG_01099
Ribosome biogenesis GTP-binding protein YsxC.
    
 
 0.948
TERG_00600
Uncharacterized protein.
  
 0.947
TERG_06088
Uncharacterized protein.
  
 0.947
TERG_06928
Uncharacterized protein.
  
 0.947
TERG_06365
Ribosomal protein L15.
    
 
 0.945
TERG_06353
Ribosomal protein L11; Belongs to the universal ribosomal protein uL11 family.
    
 
 0.943
TERG_00813
SpoU_methylase domain-containing protein.
   
 
 0.941
TERG_00632
Ribosomal protein L13; Belongs to the universal ribosomal protein uL13 family.
    
 
 0.921
TERG_07880
G domain-containing protein.
  
 
 0.920
Your Current Organism:
Trichophyton rubrum
NCBI taxonomy Id: 559305
Other names: T. rubrum CBS 118892, Trichophyton rubrum CBS 118892
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.