STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TERG_06829Uncharacterized protein. (117 aa)    
Predicted Functional Partners:
TERG_08015
Threonine synthase.
  
 0.804
TERG_00976
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
   
 0.776
TERG_02887
Aminotran_5 domain-containing protein.
    
 0.776
TERG_05419
Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine.
    
 0.776
TERG_00708
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
   
 0.771
TERG_06915
Threonine dehydratase.
   
 
 0.767
TERG_01555
PALP domain-containing protein.
   
 
 0.718
TERG_02450
Phosphoserine phosphatase SerB.
    
 0.695
TERG_04026
5-aminolevulinic acid synthase.
    
 0.694
TERG_03837
PALP domain-containing protein.
   
 
 0.692
Your Current Organism:
Trichophyton rubrum
NCBI taxonomy Id: 559305
Other names: T. rubrum CBS 118892, Trichophyton rubrum CBS 118892
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.