STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TERG_06905Rhodanese domain-containing protein. (151 aa)    
Predicted Functional Partners:
TERG_05544
Protein kinase domain-containing protein.
   
 0.840
TERG_02198
CAMK protein kinase.
   
 0.803
TERG_01704
CAMK protein kinase.
   
 0.803
TERG_00696
WEE/WEE-UNCLASSIFIED protein kinase.
   
 0.774
TERG_00744
CMGC/CDK protein kinase.
   
 0.749
TERG_02828
CMGC/CDK/CDC2 protein kinase; Belongs to the protein kinase superfamily.
   
 0.749
TERG_05354
CMGC protein kinase.
   
 0.749
TERG_06969
CMGC/CDK/CDK5 protein kinase; Belongs to the protein kinase superfamily.
   
 0.749
NAT10
RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.
 
      0.746
TERG_01614
14-3-3 family protein epsilon; Belongs to the 14-3-3 family.
    
 0.739
Your Current Organism:
Trichophyton rubrum
NCBI taxonomy Id: 559305
Other names: T. rubrum CBS 118892, Trichophyton rubrum CBS 118892
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.