STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TERG_07012rRNA 2'-O-methyltransferase fibrillarin. (311 aa)    
Predicted Functional Partners:
TERG_00962
Nop domain-containing protein.
   
 0.999
TERG_00181
Nucleolar protein 58.
   
 0.999
TERG_01597
WD_REPEATS_REGION domain-containing protein.
   
 0.999
TERG_05039
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
   
 0.999
TERG_00633
40S ribosomal protein S16; Belongs to the universal ribosomal protein uS9 family.
 
 
 0.998
TERG_02640
U3 small nucleolar RNA-associated protein 22.
   
 0.998
TERG_04441
Centromere/microtubule-binding protein CBF5.
   
 
 0.997
TERG_05844
WD_REPEATS_REGION domain-containing protein.
   
 0.997
TERG_01368
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
   
 0.996
TERG_02568
WD_REPEATS_REGION domain-containing protein.
   
 0.996
Your Current Organism:
Trichophyton rubrum
NCBI taxonomy Id: 559305
Other names: T. rubrum CBS 118892, Trichophyton rubrum CBS 118892
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.