STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TERG_07075DUF4045 domain-containing protein. (1493 aa)    
Predicted Functional Partners:
TERG_00270
Uncharacterized protein.
    
 
 0.779
TERG_05356
Uncharacterized protein.
    
 0.774
TERG_07074
Uncharacterized protein.
 
      0.761
TERG_00626
ADP-ribosylation factor-like protein 1; Belongs to the small GTPase superfamily. Arf family.
 
  
 
 0.692
TERG_01121
Conserved oligomeric Golgi complex subunit 6; Acts as component of the peripheral membrane COG complex that is involved in intra-Golgi protein trafficking. COG is located at the cis-Golgi, and regulates tethering of retrograde intra-Golgi vesicles and possibly a number of other membrane trafficking events.
    
 
 0.688
TERG_03267
Cog4 domain-containing protein.
    
 
 0.683
TERG_00201
Uncharacterized protein.
    
 
 0.677
TERG_00153
Uncharacterized protein.
    
 
 0.675
TERG_00808
Actin-like protein; Belongs to the actin family.
    
 
 0.653
TERG_06637
Actin.
    
 
 0.653
Your Current Organism:
Trichophyton rubrum
NCBI taxonomy Id: 559305
Other names: T. rubrum CBS 118892, Trichophyton rubrum CBS 118892
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