STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TERG_07840WD_REPEATS_REGION domain-containing protein. (344 aa)    
Predicted Functional Partners:
TERG_07690
SMN domain-containing protein.
   
 
 0.800
TERG_08375
ATP-dependent RNA helicase eIF4A; Belongs to the DEAD box helicase family.
   
 0.612
TERG_07745
ATP-dependent RNA helicase FAL1; Belongs to the DEAD box helicase family.
   
 0.569
TERG_12170
WD_REPEATS_REGION domain-containing protein.
  
 
 
 0.528
TERG_01343
Uncharacterized protein.
    
   0.519
TERG_06426
CMGC/GSK protein kinase; Belongs to the protein kinase superfamily.
    
  0.485
TERG_12424
RING-type domain-containing protein.
    
  0.475
TERG_12280
Protein kinase domain-containing protein.
    
  0.475
TERG_12425
Uncharacterized protein.
    
  0.475
TERG_12071
Uncharacterized protein.
    
  0.475
Your Current Organism:
Trichophyton rubrum
NCBI taxonomy Id: 559305
Other names: T. rubrum CBS 118892, Trichophyton rubrum CBS 118892
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.