STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TERG_08326DUF2183 domain-containing protein. (796 aa)    
Predicted Functional Partners:
TERG_07070
Uncharacterized protein.
 
  
  0.919
TERG_07362
UV damage endonuclease UvdE.
 
      0.897
TERG_07072
ATP-dependent RNA helicase DRS1.
 
  
   0.667
TERG_07078
Uncharacterized protein.
 
      0.663
TERG_05922
Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates.
    
 0.661
TERG_07731
2Fe-2S ferredoxin-type domain-containing protein.
   
 0.602
TERG_06781
Lactamase_B domain-containing protein.
   
 0.598
TERG_04944
PKS_KS domain-containing protein; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
  
 0.589
TERG_02459
FSH1 domain-containing protein.
   
 
 0.585
TERG_03462
DHFR domain-containing protein; Belongs to the dihydrofolate reductase family.
   
 
 0.585
Your Current Organism:
Trichophyton rubrum
NCBI taxonomy Id: 559305
Other names: T. rubrum CBS 118892, Trichophyton rubrum CBS 118892
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