STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M4BVW2_HYAAEUncharacterized protein. (413 aa)    
Predicted Functional Partners:
M4BXS6_HYAAE
Brix domain-containing protein.
   
  
 0.848
M4BX61_HYAAE
U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA.
   
   0.789
M4BDN2_HYAAE
CBF domain-containing protein.
   
    0.741
M4B2V2_HYAAE
Ribosomal RNA-processing protein 8; Probable methyltransferase required to silence rDNA. Belongs to the methyltransferase superfamily. RRP8 family.
   
  
 0.704
M4C196_HYAAE
Uncharacterized protein.
  
 
 0.700
M4C197_HYAAE
Uncharacterized protein.
  
 
 0.700
M4C6D9_HYAAE
Uncharacterized protein.
   
    0.686
M4BAK9_HYAAE
Uncharacterized protein.
   
  
 0.681
M4C117_HYAAE
Uncharacterized protein.
   
   0.681
M4BF97_HYAAE
Protein SDA1; Required for 60S pre-ribosomal subunits export to the cytoplasm; Belongs to the SDA1 family.
   
   0.675
Your Current Organism:
Hyaloperonospora arabidopsidis
NCBI taxonomy Id: 559515
Other names: H. arabidopsidis Emoy2, Hyaloperonospora arabidopsidis East Malling Oystese 2, Hyaloperonospora arabidopsidis Emoy2, Hyaloperonospora parasitica Emoy2, Hyaloperonospora parasitica strain Emoy2
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.