STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M4C3X0_HYAAEFCP1 homology domain-containing protein. (289 aa)    
Predicted Functional Partners:
M4B3K6_HYAAE
Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.
    
 0.948
M4B724_HYAAE
LNS2 domain-containing protein.
    
 0.910
M4BC38_HYAAE
LNS2 domain-containing protein.
    
 0.910
M4BIS3_HYAAE
Uncharacterized protein.
    
 0.848
M4BJI1_HYAAE
Uncharacterized protein.
   
 0.829
M4BT53_HYAAE
Uncharacterized protein.
    
 0.826
M4BFT4_HYAAE
RPOL4c domain-containing protein.
    
 0.821
M4BF90_HYAAE
RNA_pol_L_2 domain-containing protein.
    
 0.800
M4B8W9_HYAAE
Uncharacterized protein.
   
 0.783
M4BUS0_HYAAE
Uncharacterized protein.
    
 0.773
Your Current Organism:
Hyaloperonospora arabidopsidis
NCBI taxonomy Id: 559515
Other names: H. arabidopsidis Emoy2, Hyaloperonospora arabidopsidis East Malling Oystese 2, Hyaloperonospora arabidopsidis Emoy2, Hyaloperonospora parasitica Emoy2, Hyaloperonospora parasitica strain Emoy2
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