STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M4C3Y6_HYAAEUncharacterized protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. (836 aa)    
Predicted Functional Partners:
M4BB92_HYAAE
Uncharacterized protein.
   
  0.827
M4BVC6_HYAAE
Uncharacterized protein.
    
 0.785
M4BFN4_HYAAE
WD_REPEATS_REGION domain-containing protein.
   
    0.755
M4B710_HYAAE
Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family.
   
    0.738
M4B711_HYAAE
Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family.
   
    0.738
M4B1E0_HYAAE
Nudix hydrolase domain-containing protein.
  
 0.727
M4BE90_HYAAE
tRNA-dihydrouridine(47) synthase [NAD(P)(+)].
  
  
 0.697
M4BGC1_HYAAE
ATP-dependent RNA helicase; Belongs to the DEAD box helicase family. DDX54/DBP10 subfamily.
   
 
 0.688
M4BBD6_HYAAE
Uncharacterized protein.
   
  
 0.679
M4C2X2_HYAAE
tRNA (adenine(58)-N(1))-methyltransferase.
   
  
 0.679
Your Current Organism:
Hyaloperonospora arabidopsidis
NCBI taxonomy Id: 559515
Other names: H. arabidopsidis Emoy2, Hyaloperonospora arabidopsidis East Malling Oystese 2, Hyaloperonospora arabidopsidis Emoy2, Hyaloperonospora parasitica Emoy2, Hyaloperonospora parasitica strain Emoy2
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