STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BU52_00085Indole-3-glycerol phosphate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (157 aa)    
Predicted Functional Partners:
murC
UDP-N-acetylmuramate--alanine ligase; Cell wall formation; Belongs to the MurCDEF family.
       0.800
BU52_00095
Methionine sulfoxide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the MsrB Met sulfoxide reductase family.
       0.791
BU52_00080
Diaminohydroxyphosphoribosylaminopyrimidine reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.747
BU52_00075
ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.741
BU52_17920
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.655
BU52_13420
Phosphoesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.611
BU52_14885
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.593
BU52_01895
Peroxiredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.580
BU52_29975
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.559
BU52_19775
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.552
Your Current Organism:
Streptomyces toyocaensis
NCBI taxonomy Id: 55952
Other names: S. toyocaensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.