STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BU52_00450Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (219 aa)    
Predicted Functional Partners:
BU52_00455
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.837
BU52_25400
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.713
BU52_20135
FAD-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.650
BU52_20555
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
      
 0.646
BU52_00460
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.635
BU52_20140
Fe-S cluster assembly protein HesB; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.635
BU52_00445
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.602
BU52_30975
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.582
BU52_20130
Penicillin amidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.580
BU52_00345
acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
  0.537
Your Current Organism:
Streptomyces toyocaensis
NCBI taxonomy Id: 55952
Other names: S. toyocaensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.