STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BU52_01660Amine oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (416 aa)    
Predicted Functional Partners:
BU52_22170
Phytoene synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.903
BU52_22155
Lycopene cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.817
BU52_02690
Phytoene synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.792
BU52_02685
Squalene synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.771
BU52_22165
Phytoene dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.751
BU52_32830
Phytoene dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.716
BU52_01670
Deoxyribodipyrimidine photolyase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     0.667
BU52_22145
Isorenieratene synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.623
BU52_02565
3-hydroxyacyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
  0.619
BU52_31510
3-hydroxyacyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
  0.619
Your Current Organism:
Streptomyces toyocaensis
NCBI taxonomy Id: 55952
Other names: S. toyocaensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.