STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BU52_01805Gas vesicle protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (111 aa)    
Predicted Functional Partners:
BU52_01770
Gas vesicle protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.981
BU52_01800
Gas vesicle protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.981
BU52_01790
Gas vesicle protein GvpJ; Gas vesicles are small, hollow, gas filled protein structures that are found in several microbial planktonic microorganisms. They allow the positioning of the organism at the favorable depth for growth.
 
   
 0.979
gvpA
Gas vesicle synthesis-like protein; Gas vesicles are small, hollow, gas filled protein structures that are found in several microbial planktonic microorganisms. They allow the positioning of the organism at the favorable depth for growth. GvpA type proteins form the essential core of the structure.
 
   
 0.977
BU52_01775
Gas vesicle protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.977
BU52_01795
Gas vesicle protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.975
BU52_01760
Gas vesicle protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.971
BU52_01785
Cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.962
BU52_01780
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.954
gvpA-2
Gas vesicle protein; Gas vesicles are small, hollow, gas filled protein structures that are found in several microbial planktonic microorganisms. They allow the positioning of the organism at the favorable depth for growth. GvpA type proteins form the essential core of the structure.
 
   
 0.836
Your Current Organism:
Streptomyces toyocaensis
NCBI taxonomy Id: 55952
Other names: S. toyocaensis
Server load: medium (56%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.