STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BU52_02020AP endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. (332 aa)    
Predicted Functional Partners:
BU52_02015
Dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
  0.973
BU52_02025
Glycosyl hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.931
BU52_02010
Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.888
BU52_02040
Xylose isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.859
BU52_02955
3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the TPP enzyme family.
  
 
 0.819
BU52_02005
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family.
 
    0.816
BU52_03030
Myo-inositol 2-dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
  0.798
BU52_01995
ROK family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.766
BU52_02055
Xylose isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.764
BU52_02060
Phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.760
Your Current Organism:
Streptomyces toyocaensis
NCBI taxonomy Id: 55952
Other names: S. toyocaensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.