STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BU52_02050Hydrolase TatD; Derived by automated computational analysis using gene prediction method: Protein Homology. (296 aa)    
Predicted Functional Partners:
BU52_02035
UbiA prenyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.972
BU52_02040
Xylose isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.972
BU52_02045
Sugar phosphate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.972
BU52_02055
Xylose isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.972
BU52_02060
Phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.972
BU52_02030
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.969
BU52_02025
Glycosyl hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.944
BU52_02065
Tat (twin-arginine translocation) pathway signal sequence; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.938
BU52_02480
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.837
BU52_02020
AP endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.754
Your Current Organism:
Streptomyces toyocaensis
NCBI taxonomy Id: 55952
Other names: S. toyocaensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.