STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BU52_03970Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (155 aa)    
Predicted Functional Partners:
BU52_08675
Sugar kinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the carbohydrate kinase PfkB family.
   
    0.847
BU52_18175
ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.718
BU52_24050
Chitosanase; Aids in the defense against invading fungal pathogens by degrading their cell wall chitosan.
  
  
 0.700
BU52_24045
Chitosanase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.696
BU52_31195
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.691
BU52_03965
Pyridoxamine 5'-phosphate oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.671
BU52_22465
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.658
BU52_22225
Mixed polyketide synthase/non-ribosomal peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.646
BU52_31330
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.619
BU52_16815
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.589
Your Current Organism:
Streptomyces toyocaensis
NCBI taxonomy Id: 55952
Other names: S. toyocaensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.