STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BU52_04100Patatin; Derived by automated computational analysis using gene prediction method: Protein Homology. (279 aa)    
Predicted Functional Partners:
BU52_22225
Mixed polyketide synthase/non-ribosomal peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.812
BU52_09370
Type VI secretion protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.738
BU52_33320
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.723
tuf-2
Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
       0.580
BU52_13155
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.579
BU52_17600
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.560
BU52_30070
Phospholipase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.528
BU52_25330
TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.520
BU52_19155
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.470
BU52_05080
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.463
Your Current Organism:
Streptomyces toyocaensis
NCBI taxonomy Id: 55952
Other names: S. toyocaensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.