STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BU52_05175Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (318 aa)    
Predicted Functional Partners:
katG
Hydroperoxidase; Bifunctional enzyme with both catalase and broad-spectrum peroxidase activity; Belongs to the peroxidase family. Peroxidase/catalase subfamily.
     
 0.701
BU52_02025
Glycosyl hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.669
BU52_02480
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.669
BU52_33355
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.617
BU52_11850
Gluconate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.588
BU52_23585
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.551
BU52_05170
Regulatory protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.531
BU52_21185
Bi-functional transferase/deacetylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.531
BU52_11460
Bi-functional transferase/deacetylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.513
BU52_28910
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.510
Your Current Organism:
Streptomyces toyocaensis
NCBI taxonomy Id: 55952
Other names: S. toyocaensis
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.