STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BU52_05365Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (204 aa)    
Predicted Functional Partners:
BU52_01430
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.538
BU52_09215
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.538
BU52_09955
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.538
smc
Chromosome segregation protein SMC; Required for chromosome condensation and partitioning. Belongs to the SMC family.
   
 
 0.538
BU52_21430
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.538
BU52_23535
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.538
BU52_29875
Secretion protein snm4; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.531
BU52_30880
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.531
BU52_00015
Endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.523
BU52_20955
DNA repair protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.488
Your Current Organism:
Streptomyces toyocaensis
NCBI taxonomy Id: 55952
Other names: S. toyocaensis
Server load: medium (58%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.