STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BU52_06990Polysaccharide deacetylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (306 aa)    
Predicted Functional Partners:
BU52_06995
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    
0.803
BU52_00045
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.684
BU52_06985
Methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.619
BU52_32000
Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.610
BU52_18170
6-phospho-beta-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.561
BU52_11460
Bi-functional transferase/deacetylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.552
BU52_21185
Bi-functional transferase/deacetylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.543
BU52_11455
Acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.529
BU52_04490
Glycosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.490
BU52_12890
Glycosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.490
Your Current Organism:
Streptomyces toyocaensis
NCBI taxonomy Id: 55952
Other names: S. toyocaensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.