STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BU52_07190Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (87 aa)    
Predicted Functional Partners:
BU52_07195
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.857
miaA
tRNA delta(2)-isopentenylpyrophosphate transferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family.
       0.764
BU52_07205
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.706
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
    
  0.700
dapF
Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan.
       0.680
BU52_07215
Kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.649
BU52_02755
SGNH hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.633
BU52_08340
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.633
BU52_11120
SGNH hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.633
BU52_11595
Lipase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.633
Your Current Organism:
Streptomyces toyocaensis
NCBI taxonomy Id: 55952
Other names: S. toyocaensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.