STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BU52_07295Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (160 aa)    
Predicted Functional Partners:
BU52_24640
ATP-dependent DNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.843
rnhB
Ribonuclease HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.
   
 
 0.816
BU52_08155
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.756
BU52_12605
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.746
BU52_30165
Asparagine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.745
BU52_24840
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.743
BU52_12610
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.742
BU52_11650
DNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.723
BU52_07285
TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.706
BU52_12905
Regulatory protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.688
Your Current Organism:
Streptomyces toyocaensis
NCBI taxonomy Id: 55952
Other names: S. toyocaensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.