STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BU52_07325ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (634 aa)    
Predicted Functional Partners:
BU52_07320
DNA hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Nudix hydrolase family.
       0.785
BU52_07330
GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.763
BU52_06280
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.760
BU52_18430
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.760
BU52_20420
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.760
BU52_07315
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.742
BU52_15515
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.727
BU52_20430
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.722
BU52_26600
ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.721
BU52_23260
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.719
Your Current Organism:
Streptomyces toyocaensis
NCBI taxonomy Id: 55952
Other names: S. toyocaensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.