STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BU52_07410Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (257 aa)    
Predicted Functional Partners:
BU52_07415
GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.756
BU52_07400
Peptidase M16; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.730
BU52_07405
Protease; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.730
BU52_06315
Peptidase M23; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.724
BU52_07390
DNA topoisomerase IV subunit A; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.663
BU52_02925
Peptidase M23; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.632
BU52_15020
Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.622
BU52_20675
Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.620
BU52_11145
Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.576
BU52_28290
Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.558
Your Current Organism:
Streptomyces toyocaensis
NCBI taxonomy Id: 55952
Other names: S. toyocaensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.