Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BU52_08045Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (64 aa)    
Predicted Functional Partners:
BU52_31745
Sterol-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.762
BU52_02870
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.611
BU52_21700
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.603
BU52_08005
ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.586
BU52_10350
DNA primase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.559
BU52_09205
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.541
BU52_08055
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.534
BU52_11880
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.526
BU52_15170
Anti-sigma regulatory factor; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.512
BU52_18425
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.473
Your Current Organism:
Streptomyces toyocaensis
NCBI taxonomy Id: 55952
Other names: S. toyocaensis
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